BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A02SP1|AL429830
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1582 0.0
3x_Contig1035 117 4e-26
>3x_Contig1783
Length = 22123
Score = 1582 bits (798), Expect = 0.0
Identities = 805/806 (99%), Gaps = 1/806 (0%)
Strand = Plus / Plus
Query: 1 gatcctatacgaaagatacagaactgaagccttgtccggtgagatgccaactgtaggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21311 gatcctatacgaaagatacagaactgaagccttgtccggtgagatgccaactgtaggaac 21370
Query: 61 tacgactcataacagagctttcagcaccacgaacaacgaatacctaggatcacccgctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21371 tacgactcataacagagctttcagcaccacgaacaacgaatacctaggatcacccgctgt 21430
Query: 121 atctggtagagaatctgtgaggggcaatggattaccatctgcgttggggaacaatgattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21431 atctggtagagaatctgtgaggggcaatggattaccatctgcgttggggaacaatgattc 21490
Query: 181 gacttctttacattctaacaacgcgtcatcgaaccaggacacttacttggcaagagaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21491 gacttctttacattctaacaacgcgtcatcgaaccaggacacttacttggcaagagaaga 21550
Query: 241 acaaatcaagctagaagaagaaagattaagggttttcgaagaaagagtgcaacaagaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21551 acaaatcaagctagaagaagaaagattaagggttttcgaagaaagagtgcaacaagaatt 21610
Query: 301 gcaattgaagagacaggaattgctgcaaagagagcaagaattaagagaaatcgaagagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21611 gcaattgaagagacaggaattgctgcaaagagagcaagaattaagagaaatcgaagagag 21670
Query: 361 gctagaaaaggaagcccaattgaaacaggaaggaatcaaattggaacaataagttgttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21671 gctagaaaaggaagcccaattgaaacaggaaggaatcaaattggaacaataagttgttgt 21730
Query: 421 cccttcctgcacactaaatagaactacatatttcgtttctttctttaacctatacctcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21731 cccttcctgcacactaaatagaactacatatttcgtttctttctttaacctatacctcag 21790
Query: 481 ttattaccataagatagataaagcattacgaaccatttcaggctactggctgctagtcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21791 ttattaccataagatagataaagcattacgaaccatttcaggctactggctgctagtcgt 21850
Query: 541 gtgctacactttatcgatgccctaacgatcaagcaaaacctcattcatttaagaaaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21851 gtgctacactttatcgatgccctaacgatcaagcaaaacctcattcatttaagaaaaaaa 21910
Query: 601 ttcccgaacgaaaaccatataaaagccacttacttcgaggccgaaaataagacgaaaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21911 ttcccgaacgaaaaccatataaaagccacttacttcgaggccgaaaataagacgaaaaag 21970
Query: 661 acggtagaaggatggcttctgagcaccaaatgggtagtaccaggggta-cagggatacca 719
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 21971 acggtagaaggatggcttctgagcaccaaatgggtagtaccaggggtaccagggatacca 22030
Query: 720 ggtgtaccatgacctagtaaatctcctttacattatctcacacagcatgccaggaggcgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22031 ggtgtaccatgacctagtaaatctcctttacattatctcacacagcatgccaggaggcgt 22090
Query: 780 gtgccgtgttctgacaagaaaacatc 805
||||||||||||||||||||||||||
Sbjct: 22091 gtgccgtgttctgacaagaaaacatc 22116
>3x_Contig1035
Length = 4175
Score = 117 bits (59), Expect = 4e-26
Identities = 80/83 (96%), Gaps = 3/83 (3%)
Strand = Plus / Minus
Query: 784 cgtgttct-gacaagaaaacatcatgtatgaagatgtgggatggaaaagcttttagatga 842
|||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 4163 cgtgttctagacaagaaaacatcatgtatga-gatgtgggatggaaa-gcttttagatga 4106
Query: 843 tgagtaaccagatagggacaaca 865
|||||||||||||||||||||||
Sbjct: 4105 tgagtaaccagatagggacaaca 4083
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6499
Number of Sequences: 1807
Number of extensions: 6499
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 2
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)